BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008H04SP1|AL425938
(770 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig264 737 0.0
3x_Contig785 556 e-158
>3x_Contig264
Length = 1241
Score = 737 bits (371), Expect = 0.0
Identities = 374/375 (99%)
Strand = Plus / Minus
Query: 1 gatcaccagatgccagtccaccggaccttttcagttctttgctaaacaacgatacgaata 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gatcaccagatgccagtacaccggaccttttcagttctttgctaaacaacgatacgaata 316
Query: 61 ctactgcttctgctacacagatgctccctaattttgttgatgagaaagtcttgaagtatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ctactgcttctgctacacagatgctccctaattttgttgatgagaaagtcttgaagtatt 256
Query: 121 acaagttcaaagtgtccaaattgaaatcctacatcattttaataaaatgggctcttcttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 acaagttcaaagtgtccaaattgaaatcctacatcattttaataaaatgggctcttcttg 196
Query: 181 caccatacgtctactttatcatgcatcccaatcccactgttcttcaagcttccaacttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 caccatacgtctactttatcatgcatcccaatcccactgttcttcaagcttccaacttgt 136
Query: 241 tatcccaaatagtggaaagatcgaacttcttctccatctttaccggactagaaatagtat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 tatcccaaatagtggaaagatcgaacttcttctccatctttaccggactagaaatagtat 76
Query: 301 tcatctctatctactatcaaatgttgaagaaacttcaaagagataacaatgttacggcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tcatctctatctactatcaaatgttgaagaaacttcaaagagataacaatgttacggcca 16
Query: 361 cccaaaacgcaggag 375
|||||||||||||||
Sbjct: 15 cccaaaacgcaggag 1
>3x_Contig785
Length = 2769
Score = 556 bits (280), Expect = e-158
Identities = 290/294 (98%)
Strand = Plus / Plus
Query: 477 atgtacgtgacagatatatgctttgttcttgtgttattcggtgtcatgaaatattatcat 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgtacgtgacagatatatgctttgttcttgtgttattcggtgtcatgaaatattatcat 60
Query: 537 tcgtcattccctatttcagttccaatagaaccaccgattgcmgggattcaatagaaaagt 596
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 61 tcgtcattccctatttcagttccaatagaaccaccgattgcagggattcaatagaaaagt 120
Query: 597 atcttttggttgtgaaaatggaaactcgttcattaacgatcaaaactatataattctaat 656
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcttttggttgtgaaacccgaaactcgttcattaacgatcaaaactatataattctaat 180
Query: 657 tatcaattgtttattcccttaaacatgaatatgtgttgtacttccacttaaaagaacgct 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatcaattgtttattcccttaaacatgaatatgtgttgtacttccacttaaaagaacgct 240
Query: 717 ttagtatgttttcatttcattcatagaactatttaaagcctacttatatcatac 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttagtatgttttcatttcattcatagaactatttaaagcctacttatatcatac 294
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6726
Number of Sequences: 1807
Number of extensions: 6726
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 2
length of query: 770
length of database: 10,358,551
effective HSP length: 16
effective length of query: 754
effective length of database: 10,329,639
effective search space: 7788547806
effective search space used: 7788547806
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)